DNA and Protein Synthesis Part 2

  1. DNA replication occurs before mitosis because the cell realizes that it is becoming too big so it has to divide in order to keep doing its function. If the cell were to grow any bigger, it would not be able to do it’s job, so it divides into two daughter cells.
  2. The 3 steps involved in DNA replication are unwinding and unzipping, complementary base pairing, and the joining of opposite nucleotides. In the first step (unwinding and unzipping) a DNA helicase breaks the Hydrogen bonds which hold the nucleotides together. Once the bonds are broken by the helicase, the DNA structure unwinds. Then in complementary base pairing, DNA polymerase match the opposite nucleotides together; Adenine bonds with Thymine and Guanine bonds with Cytosine. Finally, in the final step, (joining of nucleotides) DNA ligase put these nucleotides together and creates two new strands of DNA. The 3 steps are different on the “leading” and “lagging” strands because the DNA polymerase can only read the DNA strand from 3′ to 5′ which means the lagging strand has to be read backwards. The “leading” strand is the one with the extra sugar at the beginning.
  3. By modelling these, we were able to represent how the hydrogen bonds break apart and the steps that follow. By using different candies, we were able to represent the polymerase, helicase, and ligase and there job pretty accurately. However, it was hard to tell which strand was the leading and lagging one based on the model. Also, since we used blue pipe cleaner for all the DNA strand backbones, you never got a clear picture of which one was the parent DNA strand vs the daughter strand.

DNA and Protein Synthesis Part 1

  1. DNA has an alpha helix shape which consists of nucleotides. Nucleotides are made of pentose, phosphate, and a nitrogenous base. They have 2 types of bases; purines and pyrimidines. Pyrimidines consist of a single ring structure with thymine and cytosine while purines have a double ring structure with adenine and guanine. Since there is complementary base pairing between the nucleotides adenine and thymine as well as guanine and cytosine, they bond together to create the alpha helix shape that DNA has. DNA also consists of antiparallel strands meaning that the sugar and phosphate are aligned in opposite directions on each backbone of the DNA helix.
  2. The activity helps model the structure as it clearly shows the nucleotides and how they bond together to create the double helix shape. However, it is hard to see that the backbone contains sugar as well as phosphate. Next time we should add a different colour bead for sugar and also maybe use a different colour bead for the phosphate so it can stand out better from the blue pipe cleaner.